Morning Glory Muffins: A Café Style Treat At Home

Founder / Chef / Everyone’s Best Friend

Andy Hay

Welcome to my kitchen. I hope to inspire you to grow as a home cook!

Alright friends, gather ‘round—because we’re diving into one of my all-time favourite muffin recipes. These Morning Glory muffins are packed with the good stuff. We’re talking warm spices, grated carrots, apples, seeds, and a citrusy punch from orange zest and juice. They’re dense, moist, naturally sweetened, and absolutely perfect for starting your day with flavour and purpose.

This morning glory muffin recipe is what I turn to when I want something hearty, healthy, and satisfying. It’s the kind of muffin that sticks with you, gives you that little morning boost, and tastes just as amazing with your coffee as it does as a mid-afternoon snack.

Recipe

Morning Glory Muffins

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5 Reviews/5.00 Average
Prep Time 15 minutes
Cook Time 30 minutes
Servings 12 muffins

Ingredients:  

  • 2 cups whole wheat flour
  • 2 tsp baking soda
  • 2 tsp cinnamon
  • ½ tsp salt
  • 3 eggs
  • 1/2 tsp nutmeg
  • ½ cup brown sugar
  • ¼ cup honey
  • cup oil
  • cup orange juice – fresh, if possible
  • zest of 1 orange
  • 2 cups grated carrots
  • 1 cup grated apple
  • ½ cup dried cranberries or raisins
  • ¼ cup pumpkin seeds + more to sprinkle on top
  • ¼ cup sunflower seeds + more to sprinkle on top
  • ¼ cup ground flax seed
  • 1 tsp vanilla

Instructions: 

  • Pre heat oven to 425 and prepare muffin tins with liners and cooking spray.
  • In a large bowl mix together the flour, baking soda, cinnamon, salt, and nutmeg. Whisk together and set aside.
  • In a separate bowl, mix together the rest of the ingredients and mix thoroughly.Make sure the brown sugar is fully dissolved.
  • Pour the wet ingredients into the dry ingredients. Using a spatula, fold everything together. Make sure to mix thoroughly to avoid any clumps of flour.
  • Line your tin with muffin liners to avoid sticking. Scoop the batter into the prepared muffin tin. This will make between 12-14 muffins depending on the size of muffin you are looking for.
  • Bake 6 minutes, and then reduce the temp to 350 and bake for an additional 17-19 minutes. Remove from oven when you can poke with a toothpick and it come out clean.
  • Once baked, remove from oven and let sit in muffin tin for 10 minutes before rolling them on a wire rack.

What Makes Morning Glory Muffins So Great?

First off, they’re not your average muffin. These are loaded with whole ingredients—like carrots, apples, cranberries, and whole wheat flour—which makes them filling, naturally sweet, and nutrient-dense. We’re also sneaking in some flax seed, pumpkin seeds, and sunflower seeds for added fibre, protein, and crunch.

There’s just something about the texture of these cinnamon-spiced muffins that makes them stand out. You get that moist, soft center thanks to the shredded veggies and fruit, with just enough structure to hold it all together. Every bite is a little bit different and a whole lot of delicious.

Let’s break down how to make this magic happen in your own kitchen. morning glory muffins

Someone holding a homemade morning glory muffin in their hand.
Now that’s how you start the day—loaded, hearty, and straight-up delicious

The Ingredients You’ll Need

There’s a long list of ingredients, but don’t worry—each one plays its role in building the flavour, texture, and nutritional boost we all want in a healthy morning glory muffins recipe.

  • Whole wheat flour is the base of this morning glory muffin recipe, and I love the extra nuttiness it brings compared to all-purpose.
  • We’re layering in warm spices like cinnamon and nutmeg—the usual suspects that pair perfectly with sweet veggies and fruits.
  • The sweetness comes from a mix of brown sugar and honey, both of which keep the muffins moist and full of depth.
  • For moisture and flavour, we’re adding grated carrots and grated apple. This combo gives you that classic moist carrot cake vibe, but in muffin form.
  • The juice and zest of an orange add brightness and acidity to balance the sweetness.
  • Eggs give the batter structure, while vanilla adds that comforting, familiar flavour.
  • And don’t forget the crunch—sunflower seeds, pumpkin seeds, ground flax seed, and cranberries or raisins all get folded into the batter for texture and extra goodness.

You could totally add walnuts, pecans, almond, or even shredded coconut if that’s your thing. I’ve seen folks use zucchini, banana, or even crushed pineapple to put their own spin on these muffins. That’s what makes this favorite muffin variety so fun—it’s endlessly customizable.

The dream team—every ingredient here pulls its weight

Tips for Nailing the Morning Glory Muffins Every Time

Whether you’re a muffin newbie or a seasoned baker, there are a few key tips that will take your morning glory muffins from good to “let’s make a double batch next time.”

1. Use two bowls—always. In one large bowl, mix your dry ingredients—that’s the whole wheat flour, baking soda, cinnamon, salt, and nutmeg. In a separate bowl, whisk together your wet ingredients: eggs, orange juice, oil, brown sugar, honey, grated produce, and vanilla.

2. Stir with care. Once it’s time to combine the wet and dry, use a spatula and fold it all together gently. Don’t overmix—just stir until everything is incorporated and there are no streaks of flour left. Overmixing leads to dense muffins, and nobody wants that.

3. Bake at a high heat first. This trick comes from one of the greats—Sally from Sally’s Baking Addiction. Start your morning glory muffins at 425 degrees F for 6 minutes, then lower the oven to 350 degrees F to finish them off. This helps get that glorious domed top.

4. Grease your muffin tin well or use liners. You can go with paper liners, a greased muffin tin, or my go-to: a 12-cup muffin tin with silicone. It makes the muffins pop right out and clean-up is a breeze.

5. Cool on a wire rack. Let them rest in the pan for about 10 minutes after baking, then move to a wire rack so they don’t steam themselves and get soggy bottoms.

Morning glory muffins cooling on a wire rack.
Carrots, apples, seeds, spice… this muffin’s got it all going on

Make It Your Own

You can swap in or add ingredients like:

  • Chopped walnuts or pecans for crunch.
  • A handful of coconut flakes or chocolate chips for extra texture or sweetness.
  • Subbing in applesauce or banana for part of the oil if you’re looking to cut back on fat.
  • If you’re out of orange juice, a splash of pineapple juice or lemon juice can work in a pinch.

    morning glory muffins

Mixing the wet sand dry ingredients to make morning glory muffins.
Big tip here: don’t overmix. We want tender muffins, not tough guys

Storing and Freezing Morning Glory Muffins

Want to make a batch ahead? These muffins store really well. Once fully cooled, keep them in an airtight container on the counter for 2-3 days, or in the fridge for up to a week. To freeze, pop them into a freezer bag or wrap individually in plastic wrap and store for up to 3 months.

Reheat from frozen in the microwave for about 30 seconds or slice and toast for a crunchy warm treat.

A morning glory muffin sitting on a wire rack to cool.
Bake once, feel good all week. Morning Glory magic right here

What Is the Secret to a Moist Muffin?

Let’s talk moisture—the holy grail of any good muffin. The secret? It’s all about the balance between wet and dry ingredients. In this recipe, we’ve got a stellar combo of grated carrots, apple, orange juice, oil, and honey working together to keep things tender and flavorful. Baking at the right temp and avoiding over mixing are also huge—remember, light hands make fluffy muffins.

Freshly squeezed sunshine going straight into the batter

Why You’ll Love This Morning Glory Muffin Recipe

These muffins are:

  • Packed with vegetables, fruit, fibre, and protein.
  • Naturally sweetened and full of extra flavor from warm spices.
  • Easy to make, bake, and store.
  • Perfect for meal prep, snacks, or a quick breakfast on the go.

Honestly, it’s like your favourite moist carrot cake decided to go to a wellness retreat and came back as a better version of itself. The combo of ingredients just works—every bite brings a little surprise: chewy cranberries, crunchy seeds, the gentle sweetness of apple and carrot, and that zesty citrus pop. So next time you’re meal prepping or just need something delicious in your life, whip up a batch of these Morning Glory muffins. Trust me—they’re a hit every single time.

Cafe-style muffins but made in your own kitchen. Let’s gooo!!

Other Recipes you Will Love!

Bakery Style Blueberry Muffins

Cranberry Pumpkin Oat Muffins

Banana Chocolate Chip Muffins

Andy Hay

Andy is the founder of ECK, Chef, and let’s admit it… the reason you’re here. He taught himself to cook, and it all paid off when he secured his spot in the season 5 Finale of Master Chef Canada. Now, Andy uses his big energy to showcase recipes that actually make people want to cook. His brand was built on butter and East Coast charm, and Andy’s kept that same energy ever since. Off-camera, you’ll find him doing what started it all: cooking for his two daughters, wife and the people he loves.

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26 Comments

Paulette says:

Was looking for a healthy muffin recipe. These came out sooo good. Enjoyed with cheese and coffee watching the game just now. Go Canada!! ☕️🏒🥅

Andy Hay says:

Close game, Paulette! Glad these muffins were a hit!

Army Girl says:

Oh my goodness, this is going to be my new favorite. These are absolutely delicious! I love everything about them. Loaded with fruit, veggies, seeds. Absolute perfection. Thank you for this amazing recipe.

Andy Hay says:

So happy you enjoyed them! They’re definitely a favourite around here, too.

Mom says:

Oh, just made these for breakfast. My kid and I loved them and to be honest, we’ve been snacking on them all day! Full of flav and goodness! Excellent recipe!






Andy Hay says:

Love this! Thanks for sharing!

Anne Marie says:

I LOVE these.

Andy Hay says:

Thanks Anne-Marie!

Sammy says:

Could we get nutritional profile for these?

Andy Hay says:

We don’t provide nutritional info at this time, Sammy but you can plug the ingredients into a free calculator for an estimate!

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